Re: slicer-users Digest, Vol 141, Issue 25

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Re: slicer-users Digest, Vol 141, Issue 25

Dear Natesan

As for as I know the Expectation Maximization (EM) based segmentation algorithm which uses the atlas is implemented only for brain. Segment Editor or Segmentation modules does not support EM based segmentation. Hope you tried EM Segmentation modules. Recently I have not tried any EM based segmentation in Slicer.


Message: 4
Date: Sun, 26 Mar 2017 10:18:45 +0000
From: iplneurosurgery <[hidden email]>
To: SPL Slicer Users <[hidden email]>
Subject: [slicer-users] Automatic Segmentation of abdominal organs
        from CT Abdomen.
Message-ID: <[hidden email]>
Content-Type: text/plain; charset="us-ascii"


We are using Slicer 4.6.2. We are trying to segment abdominal organs from CT Abdomen. We have downloaded SPL abdominal atlas. While trying to load this atlas in the "segmentation module" there is no option to load this atlas.

Kindly suggest us as how to do automatic segmentation of abdominal organs from CT and MRI Abdomen images.

Thanking you,


IPL Neurosurgery

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