problem starting with OSX 10.5.8

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problem starting with OSX 10.5.8

Aryeh Weiss
I just downloaded Slicer3, but it cannot start because it cannot find
the dylibs.

I found this problem mentioned in earlier posts, but I cannot solve it
from those posts.
One previous post mentions a setup shell script SlicerSetup.sh (or
similar), but this does not exist anywhere in my
Slicer3-3.6.1-2010-08-20-darwin-x86 directory tree.
I tried setting DYLD_LIBRARY_PATH, but I cannot seem to get it right --
something always eventually fails.

Any ideas on this would be most appreciated -- it looks like a nice
package, but so far I cannot even launch it.

--aryeh
--
Aryeh Weiss
School of Engineering
Bar Ilan University
Ramat Gan 52900 Israel

Ph:  972-3-5317638
FAX: 972-3-7384051

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Re: problem starting with OSX 10.5.8

pieper
Administrator
Hi Aryeh -

You shouldn't need to set any variables if you run the Slicer3
executable at the top level of the extracted archive.  What error
message do you get?

-Steve

On 09/27/2010 03:12 PM, Aryeh Weiss wrote:

> I just downloaded Slicer3, but it cannot start because it cannot find
> the dylibs.
>
> I found this problem mentioned in earlier posts, but I cannot solve it
> from those posts.
> One previous post mentions a setup shell script SlicerSetup.sh (or
> similar), but this does not exist anywhere in my
> Slicer3-3.6.1-2010-08-20-darwin-x86 directory tree.
> I tried setting DYLD_LIBRARY_PATH, but I cannot seem to get it right --
> something always eventually fails.
>
> Any ideas on this would be most appreciated -- it looks like a nice
> package, but so far I cannot even launch it.
>
> --aryeh
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Re: problem starting with OSX 10.5.8

pieper
Administrator
p.s. the 3.6.1 binary from 2010-08-20 does work on my intel mac running
10.5.8...



On 09/27/2010 04:52 PM, Steve Pieper wrote:

> Hi Aryeh -
>
> You shouldn't need to set any variables if you run the Slicer3
> executable at the top level of the extracted archive.  What error
> message do you get?
>
> -Steve
>
> On 09/27/2010 03:12 PM, Aryeh Weiss wrote:
>> I just downloaded Slicer3, but it cannot start because it cannot find
>> the dylibs.
>>
>> I found this problem mentioned in earlier posts, but I cannot solve it
>> from those posts.
>> One previous post mentions a setup shell script SlicerSetup.sh (or
>> similar), but this does not exist anywhere in my
>> Slicer3-3.6.1-2010-08-20-darwin-x86 directory tree.
>> I tried setting DYLD_LIBRARY_PATH, but I cannot seem to get it right --
>> something always eventually fails.
>>
>> Any ideas on this would be most appreciated -- it looks like a nice
>> package, but so far I cannot even launch it.
>>
>> --aryeh
> _______________________________________________
> slicer-users mailing list
> [hidden email]
> http://massmail.spl.harvard.edu/mailman/listinfo/slicer-users
> To unsubscribe: send email to [hidden email] with unsubscribe as the subject
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Re: problem starting with OSX 10.5.8

Aryeh Weiss

Thank you for your reply. Here is the error message when I run from the
top of the tree:
aryeh-weisss-macbookpro52-2:Slicer3-3.6.1-2010-08-20-darwin-x86 amw$
./Slicer3
Setting up launch environment...
dyld: Library not loaded:
/Users/hayes/Slicer-3-6/Slicer3-lib/Insight-build/bin/libITKFEM.3.18.dylib
   Referenced from:
/Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
   Reason: no suitable image found.  Did find:
        /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/lib/InsightToolkit/libITKFEM.3.18.dylib: unknown file type, first eight bytes: 0x00 0x00 0x00 0x00 0xA4 0x87 0xFF 0xBF

Launch
/Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
returned with error: child killed: trace trap

CHILDKILLED 16672 SIGTRAP {trace trap}
_X11TransSocketINETConnect() can't get address for
/tmp/launch-fpSStT/org.x:6000: nodename nor servname provided, or not known
Error displaying error in a popup: couldn't connect to display
"/tmp/launch-fpSStT/org.x:0"

--aryeh

On 9/27/10 11:17 PM, Steve Pieper wrote:

> p.s. the 3.6.1 binary from 2010-08-20 does work on my intel mac running
> 10.5.8...
>
>
>
> On 09/27/2010 04:52 PM, Steve Pieper wrote:
>> Hi Aryeh -
>>
>> You shouldn't need to set any variables if you run the Slicer3
>> executable at the top level of the extracted archive. What error
>> message do you get?
>>
>> -Steve
>>
>> On 09/27/2010 03:12 PM, Aryeh Weiss wrote:
>>> I just downloaded Slicer3, but it cannot start because it cannot find
>>> the dylibs.
>>>
>>> I found this problem mentioned in earlier posts, but I cannot solve it
>>> from those posts.
>>> One previous post mentions a setup shell script SlicerSetup.sh (or
>>> similar), but this does not exist anywhere in my
>>> Slicer3-3.6.1-2010-08-20-darwin-x86 directory tree.
>>> I tried setting DYLD_LIBRARY_PATH, but I cannot seem to get it right --
>>> something always eventually fails.
>>>
>>> Any ideas on this would be most appreciated -- it looks like a nice
>>> package, but so far I cannot even launch it.
>>>
>>> --aryeh
>> _______________________________________________
>> slicer-users mailing list
>> [hidden email]
>> http://massmail.spl.harvard.edu/mailman/listinfo/slicer-users
>> To unsubscribe: send email to
>> [hidden email] with unsubscribe as the
>> subject
>


--
Aryeh Weiss
School of Engineering
Bar Ilan University
Ramat Gan 52900 Israel

Ph:  972-3-5317638
FAX: 972-3-7384051

_______________________________________________
slicer-users mailing list
[hidden email]
http://massmail.spl.harvard.edu/mailman/listinfo/slicer-users
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Re: problem starting with OSX 10.5.8

pieper
Administrator
Hmmm -- interesting - it looks like that library file got corrupted
during the download/extraction process somehow.  The file
lib/InsightToolkit/libITKFEM.3.18.dylib should exist and have a size of
984296 bytes.  Maybe try re-downloading and extracting?

-Steve

On 09/27/2010 11:36 PM, Aryeh Weiss wrote:

>
> Thank you for your reply. Here is the error message when I run from the
> top of the tree:
> aryeh-weisss-macbookpro52-2:Slicer3-3.6.1-2010-08-20-darwin-x86 amw$
> ./Slicer3
> Setting up launch environment...
> dyld: Library not loaded:
> /Users/hayes/Slicer-3-6/Slicer3-lib/Insight-build/bin/libITKFEM.3.18.dylib
> Referenced from:
> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
> Reason: no suitable image found. Did find:
> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/lib/InsightToolkit/libITKFEM.3.18.dylib:
> unknown file type, first eight bytes: 0x00 0x00 0x00 0x00 0xA4 0x87 0xFF
> 0xBF
>
> Launch
> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
> returned with error: child killed: trace trap
>
> CHILDKILLED 16672 SIGTRAP {trace trap}
> _X11TransSocketINETConnect() can't get address for
> /tmp/launch-fpSStT/org.x:6000: nodename nor servname provided, or not known
> Error displaying error in a popup: couldn't connect to display
> "/tmp/launch-fpSStT/org.x:0"
>
> --aryeh
>
> On 9/27/10 11:17 PM, Steve Pieper wrote:
>> p.s. the 3.6.1 binary from 2010-08-20 does work on my intel mac running
>> 10.5.8...
>>
>>
>>
>> On 09/27/2010 04:52 PM, Steve Pieper wrote:
>>> Hi Aryeh -
>>>
>>> You shouldn't need to set any variables if you run the Slicer3
>>> executable at the top level of the extracted archive. What error
>>> message do you get?
>>>
>>> -Steve
>>>
>>> On 09/27/2010 03:12 PM, Aryeh Weiss wrote:
>>>> I just downloaded Slicer3, but it cannot start because it cannot find
>>>> the dylibs.
>>>>
>>>> I found this problem mentioned in earlier posts, but I cannot solve it
>>>> from those posts.
>>>> One previous post mentions a setup shell script SlicerSetup.sh (or
>>>> similar), but this does not exist anywhere in my
>>>> Slicer3-3.6.1-2010-08-20-darwin-x86 directory tree.
>>>> I tried setting DYLD_LIBRARY_PATH, but I cannot seem to get it right --
>>>> something always eventually fails.
>>>>
>>>> Any ideas on this would be most appreciated -- it looks like a nice
>>>> package, but so far I cannot even launch it.
>>>>
>>>> --aryeh
>>> _______________________________________________
>>> slicer-users mailing list
>>> [hidden email]
>>> http://massmail.spl.harvard.edu/mailman/listinfo/slicer-users
>>> To unsubscribe: send email to
>>> [hidden email] with unsubscribe as the
>>> subject
>>
>
>
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Re: problem starting with OSX 10.5.8

Aryeh Weiss
Thanks again for your reply.

I downloaded again and extracted.

Same problem -- here is the output:

Slicer3-3.6.1-2010-08-20-darwin-x86 amw$ ./Slicer3
Setting up launch environment...
dyld: Library not loaded:
/Users/hayes/Slicer-3-6/Slicer3-lib/Insight-build/bin/libITKFEM.3.18.dylib
   Referenced from:
/Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
   Reason: no suitable image found.  Did find:
        /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/lib/InsightToolkit/libITKFEM.3.18.dylib: unknown file type, first eight bytes: 0x00 0x00 0x00 0x00 0xA4 0x87 0xFF 0xBF

Launch
/Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
returned with error: child killed: trace trap

CHILDKILLED 17052 SIGTRAP {trace trap}
_X11TransSocketINETConnect() can't get address for
/tmp/launch-fpSStT/org.x:6000: nodename nor servname provided, or not known
Error displaying error in a popup: couldn't connect to display
"/tmp/launch-fpSStT/org.x:0"

--aryeh

On 9/28/10 1:46 PM, Steve Pieper wrote:

> Hmmm -- interesting - it looks like that library file got corrupted
> during the download/extraction process somehow. The file
> lib/InsightToolkit/libITKFEM.3.18.dylib should exist and have a size of
> 984296 bytes. Maybe try re-downloading and extracting?
>
> -Steve
>
> On 09/27/2010 11:36 PM, Aryeh Weiss wrote:
>>
>> Thank you for your reply. Here is the error message when I run from the
>> top of the tree:
>> aryeh-weisss-macbookpro52-2:Slicer3-3.6.1-2010-08-20-darwin-x86 amw$
>> ./Slicer3
>> Setting up launch environment...
>> dyld: Library not loaded:
>> /Users/hayes/Slicer-3-6/Slicer3-lib/Insight-build/bin/libITKFEM.3.18.dylib
>>
>> Referenced from:
>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
>> Reason: no suitable image found. Did find:
>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/lib/InsightToolkit/libITKFEM.3.18.dylib:
>>
>> unknown file type, first eight bytes: 0x00 0x00 0x00 0x00 0xA4 0x87 0xFF
>> 0xBF
>>
>> Launch
>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
>> returned with error: child killed: trace trap
>>
>> CHILDKILLED 16672 SIGTRAP {trace trap}
>> _X11TransSocketINETConnect() can't get address for
>> /tmp/launch-fpSStT/org.x:6000: nodename nor servname provided, or not
>> known
>> Error displaying error in a popup: couldn't connect to display
>> "/tmp/launch-fpSStT/org.x:0"
>>
>> --aryeh
>>
>> On 9/27/10 11:17 PM, Steve Pieper wrote:
>>> p.s. the 3.6.1 binary from 2010-08-20 does work on my intel mac running
>>> 10.5.8...
>>>
>>>
>>>
>>> On 09/27/2010 04:52 PM, Steve Pieper wrote:
>>>> Hi Aryeh -
>>>>
>>>> You shouldn't need to set any variables if you run the Slicer3
>>>> executable at the top level of the extracted archive. What error
>>>> message do you get?
>>>>
>>>> -Steve
>>>>
>>>> On 09/27/2010 03:12 PM, Aryeh Weiss wrote:
>>>>> I just downloaded Slicer3, but it cannot start because it cannot find
>>>>> the dylibs.
>>>>>
>>>>> I found this problem mentioned in earlier posts, but I cannot solve it
>>>>> from those posts.
>>>>> One previous post mentions a setup shell script SlicerSetup.sh (or
>>>>> similar), but this does not exist anywhere in my
>>>>> Slicer3-3.6.1-2010-08-20-darwin-x86 directory tree.
>>>>> I tried setting DYLD_LIBRARY_PATH, but I cannot seem to get it
>>>>> right --
>>>>> something always eventually fails.
>>>>>
>>>>> Any ideas on this would be most appreciated -- it looks like a nice
>>>>> package, but so far I cannot even launch it.
>>>>>
>>>>> --aryeh
>>>> _______________________________________________
>>>> slicer-users mailing list
>>>> [hidden email]
>>>> http://massmail.spl.harvard.edu/mailman/listinfo/slicer-users
>>>> To unsubscribe: send email to
>>>> [hidden email] with unsubscribe as the
>>>> subject
>>>
>>
>>
>


--
Aryeh Weiss
School of Engineering
Bar Ilan University
Ramat Gan 52900 Israel

Ph:  972-3-5317638
FAX: 972-3-7384051

_______________________________________________
slicer-users mailing list
[hidden email]
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Re: problem starting with OSX 10.5.8

pieper
Administrator
That is very curious - sorry you are having trouble.  The report of the
first 8 bytes of the file does not match the version I extracted.  We
could dig in more on that file, but maybe another idea would be to test
if a different version of slicer works on your machine?

-Steve

On 09/28/2010 09:31 AM, Aryeh Weiss wrote:

> Thanks again for your reply.
>
> I downloaded again and extracted.
>
> Same problem -- here is the output:
>
> Slicer3-3.6.1-2010-08-20-darwin-x86 amw$ ./Slicer3
> Setting up launch environment...
> dyld: Library not loaded:
> /Users/hayes/Slicer-3-6/Slicer3-lib/Insight-build/bin/libITKFEM.3.18.dylib
> Referenced from:
> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
> Reason: no suitable image found. Did find:
> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/lib/InsightToolkit/libITKFEM.3.18.dylib:
> unknown file type, first eight bytes: 0x00 0x00 0x00 0x00 0xA4 0x87 0xFF
> 0xBF
>
> Launch
> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
> returned with error: child killed: trace trap
>
> CHILDKILLED 17052 SIGTRAP {trace trap}
> _X11TransSocketINETConnect() can't get address for
> /tmp/launch-fpSStT/org.x:6000: nodename nor servname provided, or not known
> Error displaying error in a popup: couldn't connect to display
> "/tmp/launch-fpSStT/org.x:0"
>
> --aryeh
>
> On 9/28/10 1:46 PM, Steve Pieper wrote:
>> Hmmm -- interesting - it looks like that library file got corrupted
>> during the download/extraction process somehow. The file
>> lib/InsightToolkit/libITKFEM.3.18.dylib should exist and have a size of
>> 984296 bytes. Maybe try re-downloading and extracting?
>>
>> -Steve
>>
>> On 09/27/2010 11:36 PM, Aryeh Weiss wrote:
>>>
>>> Thank you for your reply. Here is the error message when I run from the
>>> top of the tree:
>>> aryeh-weisss-macbookpro52-2:Slicer3-3.6.1-2010-08-20-darwin-x86 amw$
>>> ./Slicer3
>>> Setting up launch environment...
>>> dyld: Library not loaded:
>>> /Users/hayes/Slicer-3-6/Slicer3-lib/Insight-build/bin/libITKFEM.3.18.dylib
>>>
>>>
>>> Referenced from:
>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
>>> Reason: no suitable image found. Did find:
>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/lib/InsightToolkit/libITKFEM.3.18.dylib:
>>>
>>>
>>> unknown file type, first eight bytes: 0x00 0x00 0x00 0x00 0xA4 0x87 0xFF
>>> 0xBF
>>>
>>> Launch
>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
>>> returned with error: child killed: trace trap
>>>
>>> CHILDKILLED 16672 SIGTRAP {trace trap}
>>> _X11TransSocketINETConnect() can't get address for
>>> /tmp/launch-fpSStT/org.x:6000: nodename nor servname provided, or not
>>> known
>>> Error displaying error in a popup: couldn't connect to display
>>> "/tmp/launch-fpSStT/org.x:0"
>>>
>>> --aryeh
>>>
>>> On 9/27/10 11:17 PM, Steve Pieper wrote:
>>>> p.s. the 3.6.1 binary from 2010-08-20 does work on my intel mac running
>>>> 10.5.8...
>>>>
>>>>
>>>>
>>>> On 09/27/2010 04:52 PM, Steve Pieper wrote:
>>>>> Hi Aryeh -
>>>>>
>>>>> You shouldn't need to set any variables if you run the Slicer3
>>>>> executable at the top level of the extracted archive. What error
>>>>> message do you get?
>>>>>
>>>>> -Steve
>>>>>
>>>>> On 09/27/2010 03:12 PM, Aryeh Weiss wrote:
>>>>>> I just downloaded Slicer3, but it cannot start because it cannot find
>>>>>> the dylibs.
>>>>>>
>>>>>> I found this problem mentioned in earlier posts, but I cannot
>>>>>> solve it
>>>>>> from those posts.
>>>>>> One previous post mentions a setup shell script SlicerSetup.sh (or
>>>>>> similar), but this does not exist anywhere in my
>>>>>> Slicer3-3.6.1-2010-08-20-darwin-x86 directory tree.
>>>>>> I tried setting DYLD_LIBRARY_PATH, but I cannot seem to get it
>>>>>> right --
>>>>>> something always eventually fails.
>>>>>>
>>>>>> Any ideas on this would be most appreciated -- it looks like a nice
>>>>>> package, but so far I cannot even launch it.
>>>>>>
>>>>>> --aryeh
>>>>> _______________________________________________
>>>>> slicer-users mailing list
>>>>> [hidden email]
>>>>> http://massmail.spl.harvard.edu/mailman/listinfo/slicer-users
>>>>> To unsubscribe: send email to
>>>>> [hidden email] with unsubscribe as the
>>>>> subject
>>>>
>>>
>>>
>>
>
>
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Re: problem starting with OSX 10.5.8

Aryeh Weiss
I already tried "falling back" to one version previous, without success.
It would be awkward to keep trying previous versions one by one, but if
you have a particular version to suggest, I will be happy to try it.

Alternatively, perhaps you can send me a known good file, and tell me
where to place it. If the error is unchanged, then we know something is
wrong with the search path to this file, and there is  a similarly named
file buried somewhere else.

--aryeh

On 9/28/10 4:26 PM, Steve Pieper wrote:

> That is very curious - sorry you are having trouble.  The report of the
> first 8 bytes of the file does not match the version I extracted. We
> could dig in more on that file, but maybe another idea would be to test
> if a different version of slicer works on your machine?
>
> -Steve
>
> On 09/28/2010 09:31 AM, Aryeh Weiss wrote:
>> Thanks again for your reply.
>>
>> I downloaded again and extracted.
>>
>> Same problem -- here is the output:
>>
>> Slicer3-3.6.1-2010-08-20-darwin-x86 amw$ ./Slicer3
>> Setting up launch environment...
>> dyld: Library not loaded:
>> /Users/hayes/Slicer-3-6/Slicer3-lib/Insight-build/bin/libITKFEM.3.18.dylib
>>
>> Referenced from:
>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
>> Reason: no suitable image found. Did find:
>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/lib/InsightToolkit/libITKFEM.3.18.dylib:
>>
>> unknown file type, first eight bytes: 0x00 0x00 0x00 0x00 0xA4 0x87 0xFF
>> 0xBF
>>
>> Launch
>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
>> returned with error: child killed: trace trap
>>
>> CHILDKILLED 17052 SIGTRAP {trace trap}
>> _X11TransSocketINETConnect() can't get address for
>> /tmp/launch-fpSStT/org.x:6000: nodename nor servname provided, or not
>> known
>> Error displaying error in a popup: couldn't connect to display
>> "/tmp/launch-fpSStT/org.x:0"
>>
>> --aryeh
>>
>> On 9/28/10 1:46 PM, Steve Pieper wrote:
>>> Hmmm -- interesting - it looks like that library file got corrupted
>>> during the download/extraction process somehow. The file
>>> lib/InsightToolkit/libITKFEM.3.18.dylib should exist and have a size of
>>> 984296 bytes. Maybe try re-downloading and extracting?
>>>
>>> -Steve
>>>
>>> On 09/27/2010 11:36 PM, Aryeh Weiss wrote:
>>>>
>>>> Thank you for your reply. Here is the error message when I run from the
>>>> top of the tree:
>>>> aryeh-weisss-macbookpro52-2:Slicer3-3.6.1-2010-08-20-darwin-x86 amw$
>>>> ./Slicer3
>>>> Setting up launch environment...
>>>> dyld: Library not loaded:
>>>> /Users/hayes/Slicer-3-6/Slicer3-lib/Insight-build/bin/libITKFEM.3.18.dylib
>>>>
>>>>
>>>>
>>>> Referenced from:
>>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
>>>> Reason: no suitable image found. Did find:
>>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/lib/InsightToolkit/libITKFEM.3.18.dylib:
>>>>
>>>>
>>>>
>>>> unknown file type, first eight bytes: 0x00 0x00 0x00 0x00 0xA4 0x87
>>>> 0xFF
>>>> 0xBF
>>>>
>>>> Launch
>>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
>>>> returned with error: child killed: trace trap
>>>>
>>>> CHILDKILLED 16672 SIGTRAP {trace trap}
>>>> _X11TransSocketINETConnect() can't get address for
>>>> /tmp/launch-fpSStT/org.x:6000: nodename nor servname provided, or not
>>>> known
>>>> Error displaying error in a popup: couldn't connect to display
>>>> "/tmp/launch-fpSStT/org.x:0"
>>>>
>>>> --aryeh
>>>>
>>>> On 9/27/10 11:17 PM, Steve Pieper wrote:
>>>>> p.s. the 3.6.1 binary from 2010-08-20 does work on my intel mac
>>>>> running
>>>>> 10.5.8...
>>>>>
>>>>>
>>>>>
>>>>> On 09/27/2010 04:52 PM, Steve Pieper wrote:
>>>>>> Hi Aryeh -
>>>>>>
>>>>>> You shouldn't need to set any variables if you run the Slicer3
>>>>>> executable at the top level of the extracted archive. What error
>>>>>> message do you get?
>>>>>>
>>>>>> -Steve
>>>>>>
>>>>>> On 09/27/2010 03:12 PM, Aryeh Weiss wrote:
>>>>>>> I just downloaded Slicer3, but it cannot start because it cannot
>>>>>>> find
>>>>>>> the dylibs.
>>>>>>>
>>>>>>> I found this problem mentioned in earlier posts, but I cannot
>>>>>>> solve it
>>>>>>> from those posts.
>>>>>>> One previous post mentions a setup shell script SlicerSetup.sh (or
>>>>>>> similar), but this does not exist anywhere in my
>>>>>>> Slicer3-3.6.1-2010-08-20-darwin-x86 directory tree.
>>>>>>> I tried setting DYLD_LIBRARY_PATH, but I cannot seem to get it
>>>>>>> right --
>>>>>>> something always eventually fails.
>>>>>>>
>>>>>>> Any ideas on this would be most appreciated -- it looks like a nice
>>>>>>> package, but so far I cannot even launch it.
>>>>>>>
>>>>>>> --aryeh
>>>>>> _______________________________________________
>>>>>> slicer-users mailing list
>>>>>> [hidden email]
>>>>>> http://massmail.spl.harvard.edu/mailman/listinfo/slicer-users
>>>>>> To unsubscribe: send email to
>>>>>> [hidden email] with unsubscribe as the
>>>>>> subject
>>>>>
>>>>
>>>>
>>>
>>
>>
>


--
Aryeh Weiss
School of Engineering
Bar Ilan University
Ramat Gan 52900 Israel

Ph:  972-3-5317638
FAX: 972-3-7384051

_______________________________________________
slicer-users mailing list
[hidden email]
http://massmail.spl.harvard.edu/mailman/listinfo/slicer-users
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Re: problem starting with OSX 10.5.8

pieper
Administrator
Hi Aryeh -

Here's a copy of the file that you can try downloading:

> http://dl.dropbox.com/u/1686930/libITKFEM.3.18.0.dylib

Save it in place of this file that the error message complains about:

/Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/lib/InsightToolkit/libITKFEM.3.18.dylib

Regarding which other version might work, I can't say for sure.  If the
replacement lib doesn't work, I think maybe we'll need to figure out why
your directory ends up differently after the archive is unpacked.

HTH,
Steve

On 09/28/2010 12:58 PM, Aryeh Weiss wrote:

> I already tried "falling back" to one version previous, without success.
> It would be awkward to keep trying previous versions one by one, but if
> you have a particular version to suggest, I will be happy to try it.
>
> Alternatively, perhaps you can send me a known good file, and tell me
> where to place it. If the error is unchanged, then we know something is
> wrong with the search path to this file, and there is a similarly named
> file buried somewhere else.
>
> --aryeh
>
> On 9/28/10 4:26 PM, Steve Pieper wrote:
>> That is very curious - sorry you are having trouble. The report of the
>> first 8 bytes of the file does not match the version I extracted. We
>> could dig in more on that file, but maybe another idea would be to test
>> if a different version of slicer works on your machine?
>>
>> -Steve
>>
>> On 09/28/2010 09:31 AM, Aryeh Weiss wrote:
>>> Thanks again for your reply.
>>>
>>> I downloaded again and extracted.
>>>
>>> Same problem -- here is the output:
>>>
>>> Slicer3-3.6.1-2010-08-20-darwin-x86 amw$ ./Slicer3
>>> Setting up launch environment...
>>> dyld: Library not loaded:
>>> /Users/hayes/Slicer-3-6/Slicer3-lib/Insight-build/bin/libITKFEM.3.18.dylib
>>>
>>>
>>> Referenced from:
>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
>>> Reason: no suitable image found. Did find:
>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/lib/InsightToolkit/libITKFEM.3.18.dylib:
>>>
>>>
>>> unknown file type, first eight bytes: 0x00 0x00 0x00 0x00 0xA4 0x87 0xFF
>>> 0xBF
>>>
>>> Launch
>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
>>> returned with error: child killed: trace trap
>>>
>>> CHILDKILLED 17052 SIGTRAP {trace trap}
>>> _X11TransSocketINETConnect() can't get address for
>>> /tmp/launch-fpSStT/org.x:6000: nodename nor servname provided, or not
>>> known
>>> Error displaying error in a popup: couldn't connect to display
>>> "/tmp/launch-fpSStT/org.x:0"
>>>
>>> --aryeh
>>>
>>> On 9/28/10 1:46 PM, Steve Pieper wrote:
>>>> Hmmm -- interesting - it looks like that library file got corrupted
>>>> during the download/extraction process somehow. The file
>>>> lib/InsightToolkit/libITKFEM.3.18.dylib should exist and have a size of
>>>> 984296 bytes. Maybe try re-downloading and extracting?
>>>>
>>>> -Steve
>>>>
>>>> On 09/27/2010 11:36 PM, Aryeh Weiss wrote:
>>>>>
>>>>> Thank you for your reply. Here is the error message when I run from
>>>>> the
>>>>> top of the tree:
>>>>> aryeh-weisss-macbookpro52-2:Slicer3-3.6.1-2010-08-20-darwin-x86 amw$
>>>>> ./Slicer3
>>>>> Setting up launch environment...
>>>>> dyld: Library not loaded:
>>>>> /Users/hayes/Slicer-3-6/Slicer3-lib/Insight-build/bin/libITKFEM.3.18.dylib
>>>>>
>>>>>
>>>>>
>>>>>
>>>>> Referenced from:
>>>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
>>>>>
>>>>> Reason: no suitable image found. Did find:
>>>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/lib/InsightToolkit/libITKFEM.3.18.dylib:
>>>>>
>>>>>
>>>>>
>>>>>
>>>>> unknown file type, first eight bytes: 0x00 0x00 0x00 0x00 0xA4 0x87
>>>>> 0xFF
>>>>> 0xBF
>>>>>
>>>>> Launch
>>>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
>>>>>
>>>>> returned with error: child killed: trace trap
>>>>>
>>>>> CHILDKILLED 16672 SIGTRAP {trace trap}
>>>>> _X11TransSocketINETConnect() can't get address for
>>>>> /tmp/launch-fpSStT/org.x:6000: nodename nor servname provided, or not
>>>>> known
>>>>> Error displaying error in a popup: couldn't connect to display
>>>>> "/tmp/launch-fpSStT/org.x:0"
>>>>>
>>>>> --aryeh
>>>>>
>>>>> On 9/27/10 11:17 PM, Steve Pieper wrote:
>>>>>> p.s. the 3.6.1 binary from 2010-08-20 does work on my intel mac
>>>>>> running
>>>>>> 10.5.8...
>>>>>>
>>>>>>
>>>>>>
>>>>>> On 09/27/2010 04:52 PM, Steve Pieper wrote:
>>>>>>> Hi Aryeh -
>>>>>>>
>>>>>>> You shouldn't need to set any variables if you run the Slicer3
>>>>>>> executable at the top level of the extracted archive. What error
>>>>>>> message do you get?
>>>>>>>
>>>>>>> -Steve
>>>>>>>
>>>>>>> On 09/27/2010 03:12 PM, Aryeh Weiss wrote:
>>>>>>>> I just downloaded Slicer3, but it cannot start because it cannot
>>>>>>>> find
>>>>>>>> the dylibs.
>>>>>>>>
>>>>>>>> I found this problem mentioned in earlier posts, but I cannot
>>>>>>>> solve it
>>>>>>>> from those posts.
>>>>>>>> One previous post mentions a setup shell script SlicerSetup.sh (or
>>>>>>>> similar), but this does not exist anywhere in my
>>>>>>>> Slicer3-3.6.1-2010-08-20-darwin-x86 directory tree.
>>>>>>>> I tried setting DYLD_LIBRARY_PATH, but I cannot seem to get it
>>>>>>>> right --
>>>>>>>> something always eventually fails.
>>>>>>>>
>>>>>>>> Any ideas on this would be most appreciated -- it looks like a nice
>>>>>>>> package, but so far I cannot even launch it.
>>>>>>>>
>>>>>>>> --aryeh
>>>>>>> _______________________________________________
>>>>>>> slicer-users mailing list
>>>>>>> [hidden email]
>>>>>>> http://massmail.spl.harvard.edu/mailman/listinfo/slicer-users
>>>>>>> To unsubscribe: send email to
>>>>>>> [hidden email] with unsubscribe as
>>>>>>> the
>>>>>>> subject
>>>>>>
>>>>>
>>>>>
>>>>
>>>
>>>
>>
>
>
_______________________________________________
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Re: problem starting with OSX 10.5.8

Aryeh Weiss
Hi Steve,

I downloaded the file, but still no joy.
I also tried the 3.4.3 release, but still no success. there must be
something in my environment that is messing this up.

Best regards
--aryeh

On 9/28/10 10:20 PM, Steve Pieper wrote:

> Hi Aryeh -
>
> Here's a copy of the file that you can try downloading:
>
>> http://dl.dropbox.com/u/1686930/libITKFEM.3.18.0.dylib
>
> Save it in place of this file that the error message complains about:
>
> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/lib/InsightToolkit/libITKFEM.3.18.dylib
>
>
> Regarding which other version might work, I can't say for sure. If the
> replacement lib doesn't work, I think maybe we'll need to figure out why
> your directory ends up differently after the archive is unpacked.
>
> HTH,
> Steve
>
> On 09/28/2010 12:58 PM, Aryeh Weiss wrote:
>> I already tried "falling back" to one version previous, without success.
>> It would be awkward to keep trying previous versions one by one, but if
>> you have a particular version to suggest, I will be happy to try it.
>>
>> Alternatively, perhaps you can send me a known good file, and tell me
>> where to place it. If the error is unchanged, then we know something is
>> wrong with the search path to this file, and there is a similarly named
>> file buried somewhere else.
>>
>> --aryeh
>>
>> On 9/28/10 4:26 PM, Steve Pieper wrote:
>>> That is very curious - sorry you are having trouble. The report of the
>>> first 8 bytes of the file does not match the version I extracted. We
>>> could dig in more on that file, but maybe another idea would be to test
>>> if a different version of slicer works on your machine?
>>>
>>> -Steve
>>>
>>> On 09/28/2010 09:31 AM, Aryeh Weiss wrote:
>>>> Thanks again for your reply.
>>>>
>>>> I downloaded again and extracted.
>>>>
>>>> Same problem -- here is the output:
>>>>
>>>> Slicer3-3.6.1-2010-08-20-darwin-x86 amw$ ./Slicer3
>>>> Setting up launch environment...
>>>> dyld: Library not loaded:
>>>> /Users/hayes/Slicer-3-6/Slicer3-lib/Insight-build/bin/libITKFEM.3.18.dylib
>>>>
>>>>
>>>>
>>>> Referenced from:
>>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
>>>> Reason: no suitable image found. Did find:
>>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/lib/InsightToolkit/libITKFEM.3.18.dylib:
>>>>
>>>>
>>>>
>>>> unknown file type, first eight bytes: 0x00 0x00 0x00 0x00 0xA4 0x87
>>>> 0xFF
>>>> 0xBF
>>>>
>>>> Launch
>>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
>>>> returned with error: child killed: trace trap
>>>>
>>>> CHILDKILLED 17052 SIGTRAP {trace trap}
>>>> _X11TransSocketINETConnect() can't get address for
>>>> /tmp/launch-fpSStT/org.x:6000: nodename nor servname provided, or not
>>>> known
>>>> Error displaying error in a popup: couldn't connect to display
>>>> "/tmp/launch-fpSStT/org.x:0"
>>>>
>>>> --aryeh
>>>>
>>>> On 9/28/10 1:46 PM, Steve Pieper wrote:
>>>>> Hmmm -- interesting - it looks like that library file got corrupted
>>>>> during the download/extraction process somehow. The file
>>>>> lib/InsightToolkit/libITKFEM.3.18.dylib should exist and have a
>>>>> size of
>>>>> 984296 bytes. Maybe try re-downloading and extracting?
>>>>>
>>>>> -Steve
>>>>>
>>>>> On 09/27/2010 11:36 PM, Aryeh Weiss wrote:
>>>>>>
>>>>>> Thank you for your reply. Here is the error message when I run from
>>>>>> the
>>>>>> top of the tree:
>>>>>> aryeh-weisss-macbookpro52-2:Slicer3-3.6.1-2010-08-20-darwin-x86 amw$
>>>>>> ./Slicer3
>>>>>> Setting up launch environment...
>>>>>> dyld: Library not loaded:
>>>>>> /Users/hayes/Slicer-3-6/Slicer3-lib/Insight-build/bin/libITKFEM.3.18.dylib
>>>>>>
>>>>>>
>>>>>>
>>>>>>
>>>>>>
>>>>>> Referenced from:
>>>>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
>>>>>>
>>>>>>
>>>>>> Reason: no suitable image found. Did find:
>>>>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/lib/InsightToolkit/libITKFEM.3.18.dylib:
>>>>>>
>>>>>>
>>>>>>
>>>>>>
>>>>>>
>>>>>> unknown file type, first eight bytes: 0x00 0x00 0x00 0x00 0xA4 0x87
>>>>>> 0xFF
>>>>>> 0xBF
>>>>>>
>>>>>> Launch
>>>>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
>>>>>>
>>>>>>
>>>>>> returned with error: child killed: trace trap
>>>>>>
>>>>>> CHILDKILLED 16672 SIGTRAP {trace trap}
>>>>>> _X11TransSocketINETConnect() can't get address for
>>>>>> /tmp/launch-fpSStT/org.x:6000: nodename nor servname provided, or not
>>>>>> known
>>>>>> Error displaying error in a popup: couldn't connect to display
>>>>>> "/tmp/launch-fpSStT/org.x:0"
>>>>>>
>>>>>> --aryeh
>>>>>>
>>>>>> On 9/27/10 11:17 PM, Steve Pieper wrote:
>>>>>>> p.s. the 3.6.1 binary from 2010-08-20 does work on my intel mac
>>>>>>> running
>>>>>>> 10.5.8...
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>> On 09/27/2010 04:52 PM, Steve Pieper wrote:
>>>>>>>> Hi Aryeh -
>>>>>>>>
>>>>>>>> You shouldn't need to set any variables if you run the Slicer3
>>>>>>>> executable at the top level of the extracted archive. What error
>>>>>>>> message do you get?
>>>>>>>>
>>>>>>>> -Steve
>>>>>>>>
>>>>>>>> On 09/27/2010 03:12 PM, Aryeh Weiss wrote:
>>>>>>>>> I just downloaded Slicer3, but it cannot start because it cannot
>>>>>>>>> find
>>>>>>>>> the dylibs.
>>>>>>>>>
>>>>>>>>> I found this problem mentioned in earlier posts, but I cannot
>>>>>>>>> solve it
>>>>>>>>> from those posts.
>>>>>>>>> One previous post mentions a setup shell script SlicerSetup.sh (or
>>>>>>>>> similar), but this does not exist anywhere in my
>>>>>>>>> Slicer3-3.6.1-2010-08-20-darwin-x86 directory tree.
>>>>>>>>> I tried setting DYLD_LIBRARY_PATH, but I cannot seem to get it
>>>>>>>>> right --
>>>>>>>>> something always eventually fails.
>>>>>>>>>
>>>>>>>>> Any ideas on this would be most appreciated -- it looks like a
>>>>>>>>> nice
>>>>>>>>> package, but so far I cannot even launch it.
>>>>>>>>>
>>>>>>>>> --aryeh
>>>>>>>> _______________________________________________
>>>>>>>> slicer-users mailing list
>>>>>>>> [hidden email]
>>>>>>>> http://massmail.spl.harvard.edu/mailman/listinfo/slicer-users
>>>>>>>> To unsubscribe: send email to
>>>>>>>> [hidden email] with unsubscribe as
>>>>>>>> the
>>>>>>>> subject
>>>>>>>
>>>>>>
>>>>>>
>>>>>
>>>>
>>>>
>>>
>>
>>
>


--
Aryeh Weiss
School of Engineering
Bar Ilan University
Ramat Gan 52900 Israel

Ph:  972-3-5317638
FAX: 972-3-7384051

_______________________________________________
slicer-users mailing list
[hidden email]
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Re: problem starting with OSX 10.5.8

Aryeh Weiss
In reply to this post by pieper
Hi Steve,

Before I give up, I have one question that may relate to my inability to
run slicer. In the error test, there is a line:

dyld: Library not loaded:
/Users/hayes/Slicer-3-6/Slicer3-lib/Insight-build/bin/libITKFEM.3.18.dylib
   Referenced from:
/Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real

Why is there a reference to /Users/hayes/....
I have no such user on my system -- is this path buried somewhere in Slicer?

Best regards
--aryeh

On 9/28/10 10:20 PM, Steve Pieper wrote:

> Hi Aryeh -
>
> Here's a copy of the file that you can try downloading:
>
>> http://dl.dropbox.com/u/1686930/libITKFEM.3.18.0.dylib
>
> Save it in place of this file that the error message complains about:
>
> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/lib/InsightToolkit/libITKFEM.3.18.dylib
>
>
> Regarding which other version might work, I can't say for sure. If the
> replacement lib doesn't work, I think maybe we'll need to figure out why
> your directory ends up differently after the archive is unpacked.
>
> HTH,
> Steve
>
> On 09/28/2010 12:58 PM, Aryeh Weiss wrote:
>> I already tried "falling back" to one version previous, without success.
>> It would be awkward to keep trying previous versions one by one, but if
>> you have a particular version to suggest, I will be happy to try it.
>>
>> Alternatively, perhaps you can send me a known good file, and tell me
>> where to place it. If the error is unchanged, then we know something is
>> wrong with the search path to this file, and there is a similarly named
>> file buried somewhere else.
>>
>> --aryeh
>>
>> On 9/28/10 4:26 PM, Steve Pieper wrote:
>>> That is very curious - sorry you are having trouble. The report of the
>>> first 8 bytes of the file does not match the version I extracted. We
>>> could dig in more on that file, but maybe another idea would be to test
>>> if a different version of slicer works on your machine?
>>>
>>> -Steve
>>>
>>> On 09/28/2010 09:31 AM, Aryeh Weiss wrote:
>>>> Thanks again for your reply.
>>>>
>>>> I downloaded again and extracted.
>>>>
>>>> Same problem -- here is the output:
>>>>
>>>> Slicer3-3.6.1-2010-08-20-darwin-x86 amw$ ./Slicer3
>>>> Setting up launch environment...
>>>> dyld: Library not loaded:
>>>> /Users/hayes/Slicer-3-6/Slicer3-lib/Insight-build/bin/libITKFEM.3.18.dylib
>>>>
>>>>
>>>>
>>>> Referenced from:
>>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
>>>> Reason: no suitable image found. Did find:
>>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/lib/InsightToolkit/libITKFEM.3.18.dylib:
>>>>
>>>>
>>>>
>>>> unknown file type, first eight bytes: 0x00 0x00 0x00 0x00 0xA4 0x87
>>>> 0xFF
>>>> 0xBF
>>>>
>>>> Launch
>>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
>>>> returned with error: child killed: trace trap
>>>>
>>>> CHILDKILLED 17052 SIGTRAP {trace trap}
>>>> _X11TransSocketINETConnect() can't get address for
>>>> /tmp/launch-fpSStT/org.x:6000: nodename nor servname provided, or not
>>>> known
>>>> Error displaying error in a popup: couldn't connect to display
>>>> "/tmp/launch-fpSStT/org.x:0"
>>>>
>>>> --aryeh
>>>>
>>>> On 9/28/10 1:46 PM, Steve Pieper wrote:
>>>>> Hmmm -- interesting - it looks like that library file got corrupted
>>>>> during the download/extraction process somehow. The file
>>>>> lib/InsightToolkit/libITKFEM.3.18.dylib should exist and have a
>>>>> size of
>>>>> 984296 bytes. Maybe try re-downloading and extracting?
>>>>>
>>>>> -Steve
>>>>>
>>>>> On 09/27/2010 11:36 PM, Aryeh Weiss wrote:
>>>>>>
>>>>>> Thank you for your reply. Here is the error message when I run from
>>>>>> the
>>>>>> top of the tree:
>>>>>> aryeh-weisss-macbookpro52-2:Slicer3-3.6.1-2010-08-20-darwin-x86 amw$
>>>>>> ./Slicer3
>>>>>> Setting up launch environment...
>>>>>> dyld: Library not loaded:
>>>>>> /Users/hayes/Slicer-3-6/Slicer3-lib/Insight-build/bin/libITKFEM.3.18.dylib
>>>>>>
>>>>>>
>>>>>>
>>>>>>
>>>>>>
>>>>>> Referenced from:
>>>>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
>>>>>>
>>>>>>
>>>>>> Reason: no suitable image found. Did find:
>>>>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/lib/InsightToolkit/libITKFEM.3.18.dylib:
>>>>>>
>>>>>>
>>>>>>
>>>>>>
>>>>>>
>>>>>> unknown file type, first eight bytes: 0x00 0x00 0x00 0x00 0xA4 0x87
>>>>>> 0xFF
>>>>>> 0xBF
>>>>>>
>>>>>> Launch
>>>>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
>>>>>>
>>>>>>
>>>>>> returned with error: child killed: trace trap
>>>>>>
>>>>>> CHILDKILLED 16672 SIGTRAP {trace trap}
>>>>>> _X11TransSocketINETConnect() can't get address for
>>>>>> /tmp/launch-fpSStT/org.x:6000: nodename nor servname provided, or not
>>>>>> known
>>>>>> Error displaying error in a popup: couldn't connect to display
>>>>>> "/tmp/launch-fpSStT/org.x:0"
>>>>>>
>>>>>> --aryeh
>>>>>>
>>>>>> On 9/27/10 11:17 PM, Steve Pieper wrote:
>>>>>>> p.s. the 3.6.1 binary from 2010-08-20 does work on my intel mac
>>>>>>> running
>>>>>>> 10.5.8...
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>> On 09/27/2010 04:52 PM, Steve Pieper wrote:
>>>>>>>> Hi Aryeh -
>>>>>>>>
>>>>>>>> You shouldn't need to set any variables if you run the Slicer3
>>>>>>>> executable at the top level of the extracted archive. What error
>>>>>>>> message do you get?
>>>>>>>>
>>>>>>>> -Steve
>>>>>>>>
>>>>>>>> On 09/27/2010 03:12 PM, Aryeh Weiss wrote:
>>>>>>>>> I just downloaded Slicer3, but it cannot start because it cannot
>>>>>>>>> find
>>>>>>>>> the dylibs.
>>>>>>>>>
>>>>>>>>> I found this problem mentioned in earlier posts, but I cannot
>>>>>>>>> solve it
>>>>>>>>> from those posts.
>>>>>>>>> One previous post mentions a setup shell script SlicerSetup.sh (or
>>>>>>>>> similar), but this does not exist anywhere in my
>>>>>>>>> Slicer3-3.6.1-2010-08-20-darwin-x86 directory tree.
>>>>>>>>> I tried setting DYLD_LIBRARY_PATH, but I cannot seem to get it
>>>>>>>>> right --
>>>>>>>>> something always eventually fails.
>>>>>>>>>
>>>>>>>>> Any ideas on this would be most appreciated -- it looks like a
>>>>>>>>> nice
>>>>>>>>> package, but so far I cannot even launch it.
>>>>>>>>>
>>>>>>>>> --aryeh
>>>>>>>> _______________________________________________
>>>>>>>> slicer-users mailing list
>>>>>>>> [hidden email]
>>>>>>>> http://massmail.spl.harvard.edu/mailman/listinfo/slicer-users
>>>>>>>> To unsubscribe: send email to
>>>>>>>> [hidden email] with unsubscribe as
>>>>>>>> the
>>>>>>>> subject
>>>>>>>
>>>>>>
>>>>>>
>>>>>
>>>>
>>>>
>>>
>>
>>
>


--
Aryeh Weiss
School of Engineering
Bar Ilan University
Ramat Gan 52900 Israel

Ph:  972-3-5317638
FAX: 972-3-7384051

_______________________________________________
slicer-users mailing list
[hidden email]
http://massmail.spl.harvard.edu/mailman/listinfo/slicer-users
To unsubscribe: send email to
[hidden email] with unsubscribe as the
subject

_______________________________________________
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Re: problem starting with OSX 10.5.8

pieper
Administrator
Hi Aryeh -

I think that's a red herring - /Users/hayes refers to the original build
directory, but it's clear from your error messages that is it finding
the distribution version of that file, in your Desktop folder.  It's
just that the installation appears to have gotten corrupted for some
unknown reason.


Googling for "mac dylib unknown file type, first eight bytes" turns up
lots of error reports about similar issues, but no real solutions that I
could see...  It's a mystery to me.

-Steve

On 09/30/2010 03:28 PM, Aryeh Weiss wrote:

> Hi Steve,
>
> Before I give up, I have one question that may relate to my inability to
> run slicer. In the error test, there is a line:
>
> dyld: Library not loaded:
> /Users/hayes/Slicer-3-6/Slicer3-lib/Insight-build/bin/libITKFEM.3.18.dylib
> Referenced from:
> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
>
> Why is there a reference to /Users/hayes/....
> I have no such user on my system -- is this path buried somewhere in
> Slicer?
>
> Best regards
> --aryeh
>
> On 9/28/10 10:20 PM, Steve Pieper wrote:
>> Hi Aryeh -
>>
>> Here's a copy of the file that you can try downloading:
>>
>>> http://dl.dropbox.com/u/1686930/libITKFEM.3.18.0.dylib
>>
>> Save it in place of this file that the error message complains about:
>>
>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/lib/InsightToolkit/libITKFEM.3.18.dylib
>>
>>
>>
>> Regarding which other version might work, I can't say for sure. If the
>> replacement lib doesn't work, I think maybe we'll need to figure out why
>> your directory ends up differently after the archive is unpacked.
>>
>> HTH,
>> Steve
>>
>> On 09/28/2010 12:58 PM, Aryeh Weiss wrote:
>>> I already tried "falling back" to one version previous, without success.
>>> It would be awkward to keep trying previous versions one by one, but if
>>> you have a particular version to suggest, I will be happy to try it.
>>>
>>> Alternatively, perhaps you can send me a known good file, and tell me
>>> where to place it. If the error is unchanged, then we know something is
>>> wrong with the search path to this file, and there is a similarly named
>>> file buried somewhere else.
>>>
>>> --aryeh
>>>
>>> On 9/28/10 4:26 PM, Steve Pieper wrote:
>>>> That is very curious - sorry you are having trouble. The report of the
>>>> first 8 bytes of the file does not match the version I extracted. We
>>>> could dig in more on that file, but maybe another idea would be to test
>>>> if a different version of slicer works on your machine?
>>>>
>>>> -Steve
>>>>
>>>> On 09/28/2010 09:31 AM, Aryeh Weiss wrote:
>>>>> Thanks again for your reply.
>>>>>
>>>>> I downloaded again and extracted.
>>>>>
>>>>> Same problem -- here is the output:
>>>>>
>>>>> Slicer3-3.6.1-2010-08-20-darwin-x86 amw$ ./Slicer3
>>>>> Setting up launch environment...
>>>>> dyld: Library not loaded:
>>>>> /Users/hayes/Slicer-3-6/Slicer3-lib/Insight-build/bin/libITKFEM.3.18.dylib
>>>>>
>>>>>
>>>>>
>>>>>
>>>>> Referenced from:
>>>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
>>>>>
>>>>> Reason: no suitable image found. Did find:
>>>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/lib/InsightToolkit/libITKFEM.3.18.dylib:
>>>>>
>>>>>
>>>>>
>>>>>
>>>>> unknown file type, first eight bytes: 0x00 0x00 0x00 0x00 0xA4 0x87
>>>>> 0xFF
>>>>> 0xBF
>>>>>
>>>>> Launch
>>>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
>>>>>
>>>>> returned with error: child killed: trace trap
>>>>>
>>>>> CHILDKILLED 17052 SIGTRAP {trace trap}
>>>>> _X11TransSocketINETConnect() can't get address for
>>>>> /tmp/launch-fpSStT/org.x:6000: nodename nor servname provided, or not
>>>>> known
>>>>> Error displaying error in a popup: couldn't connect to display
>>>>> "/tmp/launch-fpSStT/org.x:0"
>>>>>
>>>>> --aryeh
>>>>>
>>>>> On 9/28/10 1:46 PM, Steve Pieper wrote:
>>>>>> Hmmm -- interesting - it looks like that library file got corrupted
>>>>>> during the download/extraction process somehow. The file
>>>>>> lib/InsightToolkit/libITKFEM.3.18.dylib should exist and have a
>>>>>> size of
>>>>>> 984296 bytes. Maybe try re-downloading and extracting?
>>>>>>
>>>>>> -Steve
>>>>>>
>>>>>> On 09/27/2010 11:36 PM, Aryeh Weiss wrote:
>>>>>>>
>>>>>>> Thank you for your reply. Here is the error message when I run from
>>>>>>> the
>>>>>>> top of the tree:
>>>>>>> aryeh-weisss-macbookpro52-2:Slicer3-3.6.1-2010-08-20-darwin-x86 amw$
>>>>>>> ./Slicer3
>>>>>>> Setting up launch environment...
>>>>>>> dyld: Library not loaded:
>>>>>>> /Users/hayes/Slicer-3-6/Slicer3-lib/Insight-build/bin/libITKFEM.3.18.dylib
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>> Referenced from:
>>>>>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>> Reason: no suitable image found. Did find:
>>>>>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/lib/InsightToolkit/libITKFEM.3.18.dylib:
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>> unknown file type, first eight bytes: 0x00 0x00 0x00 0x00 0xA4 0x87
>>>>>>> 0xFF
>>>>>>> 0xBF
>>>>>>>
>>>>>>> Launch
>>>>>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>> returned with error: child killed: trace trap
>>>>>>>
>>>>>>> CHILDKILLED 16672 SIGTRAP {trace trap}
>>>>>>> _X11TransSocketINETConnect() can't get address for
>>>>>>> /tmp/launch-fpSStT/org.x:6000: nodename nor servname provided, or
>>>>>>> not
>>>>>>> known
>>>>>>> Error displaying error in a popup: couldn't connect to display
>>>>>>> "/tmp/launch-fpSStT/org.x:0"
>>>>>>>
>>>>>>> --aryeh
>>>>>>>
>>>>>>> On 9/27/10 11:17 PM, Steve Pieper wrote:
>>>>>>>> p.s. the 3.6.1 binary from 2010-08-20 does work on my intel mac
>>>>>>>> running
>>>>>>>> 10.5.8...
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> On 09/27/2010 04:52 PM, Steve Pieper wrote:
>>>>>>>>> Hi Aryeh -
>>>>>>>>>
>>>>>>>>> You shouldn't need to set any variables if you run the Slicer3
>>>>>>>>> executable at the top level of the extracted archive. What error
>>>>>>>>> message do you get?
>>>>>>>>>
>>>>>>>>> -Steve
>>>>>>>>>
>>>>>>>>> On 09/27/2010 03:12 PM, Aryeh Weiss wrote:
>>>>>>>>>> I just downloaded Slicer3, but it cannot start because it cannot
>>>>>>>>>> find
>>>>>>>>>> the dylibs.
>>>>>>>>>>
>>>>>>>>>> I found this problem mentioned in earlier posts, but I cannot
>>>>>>>>>> solve it
>>>>>>>>>> from those posts.
>>>>>>>>>> One previous post mentions a setup shell script SlicerSetup.sh
>>>>>>>>>> (or
>>>>>>>>>> similar), but this does not exist anywhere in my
>>>>>>>>>> Slicer3-3.6.1-2010-08-20-darwin-x86 directory tree.
>>>>>>>>>> I tried setting DYLD_LIBRARY_PATH, but I cannot seem to get it
>>>>>>>>>> right --
>>>>>>>>>> something always eventually fails.
>>>>>>>>>>
>>>>>>>>>> Any ideas on this would be most appreciated -- it looks like a
>>>>>>>>>> nice
>>>>>>>>>> package, but so far I cannot even launch it.
>>>>>>>>>>
>>>>>>>>>> --aryeh
>>>>>>>>> _______________________________________________
>>>>>>>>> slicer-users mailing list
>>>>>>>>> [hidden email]
>>>>>>>>> http://massmail.spl.harvard.edu/mailman/listinfo/slicer-users
>>>>>>>>> To unsubscribe: send email to
>>>>>>>>> [hidden email] with unsubscribe as
>>>>>>>>> the
>>>>>>>>> subject
>>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>
>>>>>
>>>>>
>>>>
>>>
>>>
>>
>
>
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Re: problem starting with OSX 10.5.8

Aryeh Weiss


I think I got it. It seems that all over the lib directories, I have
things like this:

-rwxr-xr-x   1 amw  staff    84300 Aug  4 02:23 libvtkzlib.5.6.0.dylib
-rwxr-xr-x   1 amw  staff        0 Aug 20 18:52 libvtkzlib.5.6.dylib
-rwxr-xr-x   1 amw  staff        0 Aug 20 18:52 libvtkzlib.dylib
-

Then, when I launch Slicer3, I get the following:

dyld: Library not loaded: libvtkzlib.5.6.dylib
   Referenced from:
/Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
   Reason: no suitable image found.  Did find:
        /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/lib/vtk-5.6/libvtkzlib.5.6.dylib: unknown file type, first eight bytes: 0x00 0x00 0x00 0x00 0x98 0x83 0xFF 0xBF

Note that it is a different dylib this time, and it is the zero length
file that is referenced, and which then fails.

At first it was files in Insight, where the zero length files were 3.18
and the nonzero length files were 3.18.0 . So I renamed all the 3.18.0
files to 3.18, and then the error occurred in a different dylib
directory.  After two rounds of this, I gave up trying to manually do this.

I think that the original intention might have been to link the
"generic" names to the subversion specific names. Anyway, if this can be
done in the release, it will be a lot easier than for me to keep
launching the app, see where it fails , link or rename, and then iterate
-- there are a lot of dylib directories.

--aryeh

On 9/30/10 10:11 PM, Steve Pieper wrote:

> Hi Aryeh -
>
> I think that's a red herring - /Users/hayes refers to the original build
> directory, but it's clear from your error messages that is it finding
> the distribution version of that file, in your Desktop folder. It's just
> that the installation appears to have gotten corrupted for some unknown
> reason.
>
>
> Googling for "mac dylib unknown file type, first eight bytes" turns up
> lots of error reports about similar issues, but no real solutions that I
> could see... It's a mystery to me.
>
> -Steve
>
> On 09/30/2010 03:28 PM, Aryeh Weiss wrote:
>> Hi Steve,
>>
>> Before I give up, I have one question that may relate to my inability to
>> run slicer. In the error test, there is a line:
>>
>> dyld: Library not loaded:
>> /Users/hayes/Slicer-3-6/Slicer3-lib/Insight-build/bin/libITKFEM.3.18.dylib
>>
>> Referenced from:
>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
>>
>> Why is there a reference to /Users/hayes/....
>> I have no such user on my system -- is this path buried somewhere in
>> Slicer?
>>
>> Best regards
>> --aryeh
>>
>> On 9/28/10 10:20 PM, Steve Pieper wrote:
>>> Hi Aryeh -
>>>
>>> Here's a copy of the file that you can try downloading:
>>>
>>>> http://dl.dropbox.com/u/1686930/libITKFEM.3.18.0.dylib
>>>
>>> Save it in place of this file that the error message complains about:
>>>
>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/lib/InsightToolkit/libITKFEM.3.18.dylib
>>>
>>>
>>>
>>>
>>> Regarding which other version might work, I can't say for sure. If the
>>> replacement lib doesn't work, I think maybe we'll need to figure out why
>>> your directory ends up differently after the archive is unpacked.
>>>
>>> HTH,
>>> Steve
>>>
>>> On 09/28/2010 12:58 PM, Aryeh Weiss wrote:
>>>> I already tried "falling back" to one version previous, without
>>>> success.
>>>> It would be awkward to keep trying previous versions one by one, but if
>>>> you have a particular version to suggest, I will be happy to try it.
>>>>
>>>> Alternatively, perhaps you can send me a known good file, and tell me
>>>> where to place it. If the error is unchanged, then we know something is
>>>> wrong with the search path to this file, and there is a similarly named
>>>> file buried somewhere else.
>>>>
>>>> --aryeh
>>>>
>>>> On 9/28/10 4:26 PM, Steve Pieper wrote:
>>>>> That is very curious - sorry you are having trouble. The report of the
>>>>> first 8 bytes of the file does not match the version I extracted. We
>>>>> could dig in more on that file, but maybe another idea would be to
>>>>> test
>>>>> if a different version of slicer works on your machine?
>>>>>
>>>>> -Steve
>>>>>
>>>>> On 09/28/2010 09:31 AM, Aryeh Weiss wrote:
>>>>>> Thanks again for your reply.
>>>>>>
>>>>>> I downloaded again and extracted.
>>>>>>
>>>>>> Same problem -- here is the output:
>>>>>>
>>>>>> Slicer3-3.6.1-2010-08-20-darwin-x86 amw$ ./Slicer3
>>>>>> Setting up launch environment...
>>>>>> dyld: Library not loaded:
>>>>>> /Users/hayes/Slicer-3-6/Slicer3-lib/Insight-build/bin/libITKFEM.3.18.dylib
>>>>>>
>>>>>>
>>>>>>
>>>>>>
>>>>>>
>>>>>> Referenced from:
>>>>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
>>>>>>
>>>>>>
>>>>>> Reason: no suitable image found. Did find:
>>>>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/lib/InsightToolkit/libITKFEM.3.18.dylib:
>>>>>>
>>>>>>
>>>>>>
>>>>>>
>>>>>>
>>>>>> unknown file type, first eight bytes: 0x00 0x00 0x00 0x00 0xA4 0x87
>>>>>> 0xFF
>>>>>> 0xBF
>>>>>>
>>>>>> Launch
>>>>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
>>>>>>
>>>>>>
>>>>>> returned with error: child killed: trace trap
>>>>>>
>>>>>> CHILDKILLED 17052 SIGTRAP {trace trap}
>>>>>> _X11TransSocketINETConnect() can't get address for
>>>>>> /tmp/launch-fpSStT/org.x:6000: nodename nor servname provided, or not
>>>>>> known
>>>>>> Error displaying error in a popup: couldn't connect to display
>>>>>> "/tmp/launch-fpSStT/org.x:0"
>>>>>>
>>>>>> --aryeh
>>>>>>
>>>>>> On 9/28/10 1:46 PM, Steve Pieper wrote:
>>>>>>> Hmmm -- interesting - it looks like that library file got corrupted
>>>>>>> during the download/extraction process somehow. The file
>>>>>>> lib/InsightToolkit/libITKFEM.3.18.dylib should exist and have a
>>>>>>> size of
>>>>>>> 984296 bytes. Maybe try re-downloading and extracting?
>>>>>>>
>>>>>>> -Steve
>>>>>>>
>>>>>>> On 09/27/2010 11:36 PM, Aryeh Weiss wrote:
>>>>>>>>
>>>>>>>> Thank you for your reply. Here is the error message when I run from
>>>>>>>> the
>>>>>>>> top of the tree:
>>>>>>>> aryeh-weisss-macbookpro52-2:Slicer3-3.6.1-2010-08-20-darwin-x86
>>>>>>>> amw$
>>>>>>>> ./Slicer3
>>>>>>>> Setting up launch environment...
>>>>>>>> dyld: Library not loaded:
>>>>>>>> /Users/hayes/Slicer-3-6/Slicer3-lib/Insight-build/bin/libITKFEM.3.18.dylib
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> Referenced from:
>>>>>>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> Reason: no suitable image found. Did find:
>>>>>>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/lib/InsightToolkit/libITKFEM.3.18.dylib:
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> unknown file type, first eight bytes: 0x00 0x00 0x00 0x00 0xA4 0x87
>>>>>>>> 0xFF
>>>>>>>> 0xBF
>>>>>>>>
>>>>>>>> Launch
>>>>>>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> returned with error: child killed: trace trap
>>>>>>>>
>>>>>>>> CHILDKILLED 16672 SIGTRAP {trace trap}
>>>>>>>> _X11TransSocketINETConnect() can't get address for
>>>>>>>> /tmp/launch-fpSStT/org.x:6000: nodename nor servname provided, or
>>>>>>>> not
>>>>>>>> known
>>>>>>>> Error displaying error in a popup: couldn't connect to display
>>>>>>>> "/tmp/launch-fpSStT/org.x:0"
>>>>>>>>
>>>>>>>> --aryeh
>>>>>>>>
>>>>>>>> On 9/27/10 11:17 PM, Steve Pieper wrote:
>>>>>>>>> p.s. the 3.6.1 binary from 2010-08-20 does work on my intel mac
>>>>>>>>> running
>>>>>>>>> 10.5.8...
>>>>>>>>>
>>>>>>>>>
>>>>>>>>>
>>>>>>>>> On 09/27/2010 04:52 PM, Steve Pieper wrote:
>>>>>>>>>> Hi Aryeh -
>>>>>>>>>>
>>>>>>>>>> You shouldn't need to set any variables if you run the Slicer3
>>>>>>>>>> executable at the top level of the extracted archive. What error
>>>>>>>>>> message do you get?
>>>>>>>>>>
>>>>>>>>>> -Steve
>>>>>>>>>>
>>>>>>>>>> On 09/27/2010 03:12 PM, Aryeh Weiss wrote:
>>>>>>>>>>> I just downloaded Slicer3, but it cannot start because it cannot
>>>>>>>>>>> find
>>>>>>>>>>> the dylibs.
>>>>>>>>>>>
>>>>>>>>>>> I found this problem mentioned in earlier posts, but I cannot
>>>>>>>>>>> solve it
>>>>>>>>>>> from those posts.
>>>>>>>>>>> One previous post mentions a setup shell script SlicerSetup.sh
>>>>>>>>>>> (or
>>>>>>>>>>> similar), but this does not exist anywhere in my
>>>>>>>>>>> Slicer3-3.6.1-2010-08-20-darwin-x86 directory tree.
>>>>>>>>>>> I tried setting DYLD_LIBRARY_PATH, but I cannot seem to get it
>>>>>>>>>>> right --
>>>>>>>>>>> something always eventually fails.
>>>>>>>>>>>
>>>>>>>>>>> Any ideas on this would be most appreciated -- it looks like a
>>>>>>>>>>> nice
>>>>>>>>>>> package, but so far I cannot even launch it.
>>>>>>>>>>>
>>>>>>>>>>> --aryeh
>>>>>>>>>> _______________________________________________
>>>>>>>>>> slicer-users mailing list
>>>>>>>>>> [hidden email]
>>>>>>>>>> http://massmail.spl.harvard.edu/mailman/listinfo/slicer-users
>>>>>>>>>> To unsubscribe: send email to
>>>>>>>>>> [hidden email] with unsubscribe as
>>>>>>>>>> the
>>>>>>>>>> subject
>>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>
>>>>>>
>>>>>>
>>>>>
>>>>
>>>>
>>>
>>
>>
>


--
Aryeh Weiss
School of Engineering
Bar Ilan University
Ramat Gan 52900 Israel

Ph:  972-3-5317638
FAX: 972-3-7384051

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Re: problem starting with OSX 10.5.8

pieper
Administrator
Ahh - excellent clue! - these 0 length files should actually be symbolic
links.  That is, they should look like this:

common:vtk-5.6 pieper$ ls -l libvtkzl*
-rwxr-xr-x@ 1 pieper  staff  84300 Mar 30  2010 libvtkzlib.5.6.0.dylib
lrwxr-xr-x@ 1 pieper  staff     22 Apr 27 16:10 libvtkzlib.5.6.dylib ->
libvtkzlib.5.6.0.dylib
lrwxr-xr-x@ 1 pieper  staff     20 Apr 27 16:10 libvtkzlib.dylib ->
libvtkzlib.5.6.dylib


I wonder if this is because of the disk format of the volume where you
extracted slicer - is it an external widows-formated drive by any chance?

If you can try on a mac-formatted drive (like the root volume)?

Steve

On 09/30/2010 05:03 PM, Aryeh Weiss wrote:

>
>
> I think I got it. It seems that all over the lib directories, I have
> things like this:
>
> -rwxr-xr-x 1 amw staff 84300 Aug 4 02:23 libvtkzlib.5.6.0.dylib
> -rwxr-xr-x 1 amw staff 0 Aug 20 18:52 libvtkzlib.5.6.dylib
> -rwxr-xr-x 1 amw staff 0 Aug 20 18:52 libvtkzlib.dylib
> -
>
> Then, when I launch Slicer3, I get the following:
>
> dyld: Library not loaded: libvtkzlib.5.6.dylib
> Referenced from:
> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
> Reason: no suitable image found. Did find:
> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/lib/vtk-5.6/libvtkzlib.5.6.dylib:
> unknown file type, first eight bytes: 0x00 0x00 0x00 0x00 0x98 0x83 0xFF
> 0xBF
>
> Note that it is a different dylib this time, and it is the zero length
> file that is referenced, and which then fails.
>
> At first it was files in Insight, where the zero length files were 3.18
> and the nonzero length files were 3.18.0 . So I renamed all the 3.18.0
> files to 3.18, and then the error occurred in a different dylib
> directory. After two rounds of this, I gave up trying to manually do this.
>
> I think that the original intention might have been to link the
> "generic" names to the subversion specific names. Anyway, if this can be
> done in the release, it will be a lot easier than for me to keep
> launching the app, see where it fails , link or rename, and then iterate
> -- there are a lot of dylib directories.
>
> --aryeh
>
> On 9/30/10 10:11 PM, Steve Pieper wrote:
>> Hi Aryeh -
>>
>> I think that's a red herring - /Users/hayes refers to the original build
>> directory, but it's clear from your error messages that is it finding
>> the distribution version of that file, in your Desktop folder. It's just
>> that the installation appears to have gotten corrupted for some unknown
>> reason.
>>
>>
>> Googling for "mac dylib unknown file type, first eight bytes" turns up
>> lots of error reports about similar issues, but no real solutions that I
>> could see... It's a mystery to me.
>>
>> -Steve
>>
>> On 09/30/2010 03:28 PM, Aryeh Weiss wrote:
>>> Hi Steve,
>>>
>>> Before I give up, I have one question that may relate to my inability to
>>> run slicer. In the error test, there is a line:
>>>
>>> dyld: Library not loaded:
>>> /Users/hayes/Slicer-3-6/Slicer3-lib/Insight-build/bin/libITKFEM.3.18.dylib
>>>
>>>
>>> Referenced from:
>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
>>>
>>> Why is there a reference to /Users/hayes/....
>>> I have no such user on my system -- is this path buried somewhere in
>>> Slicer?
>>>
>>> Best regards
>>> --aryeh
>>>
>>> On 9/28/10 10:20 PM, Steve Pieper wrote:
>>>> Hi Aryeh -
>>>>
>>>> Here's a copy of the file that you can try downloading:
>>>>
>>>>> http://dl.dropbox.com/u/1686930/libITKFEM.3.18.0.dylib
>>>>
>>>> Save it in place of this file that the error message complains about:
>>>>
>>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/lib/InsightToolkit/libITKFEM.3.18.dylib
>>>>
>>>>
>>>>
>>>>
>>>>
>>>> Regarding which other version might work, I can't say for sure. If the
>>>> replacement lib doesn't work, I think maybe we'll need to figure out
>>>> why
>>>> your directory ends up differently after the archive is unpacked.
>>>>
>>>> HTH,
>>>> Steve
>>>>
>>>> On 09/28/2010 12:58 PM, Aryeh Weiss wrote:
>>>>> I already tried "falling back" to one version previous, without
>>>>> success.
>>>>> It would be awkward to keep trying previous versions one by one,
>>>>> but if
>>>>> you have a particular version to suggest, I will be happy to try it.
>>>>>
>>>>> Alternatively, perhaps you can send me a known good file, and tell me
>>>>> where to place it. If the error is unchanged, then we know
>>>>> something is
>>>>> wrong with the search path to this file, and there is a similarly
>>>>> named
>>>>> file buried somewhere else.
>>>>>
>>>>> --aryeh
>>>>>
>>>>> On 9/28/10 4:26 PM, Steve Pieper wrote:
>>>>>> That is very curious - sorry you are having trouble. The report of
>>>>>> the
>>>>>> first 8 bytes of the file does not match the version I extracted. We
>>>>>> could dig in more on that file, but maybe another idea would be to
>>>>>> test
>>>>>> if a different version of slicer works on your machine?
>>>>>>
>>>>>> -Steve
>>>>>>
>>>>>> On 09/28/2010 09:31 AM, Aryeh Weiss wrote:
>>>>>>> Thanks again for your reply.
>>>>>>>
>>>>>>> I downloaded again and extracted.
>>>>>>>
>>>>>>> Same problem -- here is the output:
>>>>>>>
>>>>>>> Slicer3-3.6.1-2010-08-20-darwin-x86 amw$ ./Slicer3
>>>>>>> Setting up launch environment...
>>>>>>> dyld: Library not loaded:
>>>>>>> /Users/hayes/Slicer-3-6/Slicer3-lib/Insight-build/bin/libITKFEM.3.18.dylib
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>> Referenced from:
>>>>>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>> Reason: no suitable image found. Did find:
>>>>>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/lib/InsightToolkit/libITKFEM.3.18.dylib:
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>> unknown file type, first eight bytes: 0x00 0x00 0x00 0x00 0xA4 0x87
>>>>>>> 0xFF
>>>>>>> 0xBF
>>>>>>>
>>>>>>> Launch
>>>>>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>> returned with error: child killed: trace trap
>>>>>>>
>>>>>>> CHILDKILLED 17052 SIGTRAP {trace trap}
>>>>>>> _X11TransSocketINETConnect() can't get address for
>>>>>>> /tmp/launch-fpSStT/org.x:6000: nodename nor servname provided, or
>>>>>>> not
>>>>>>> known
>>>>>>> Error displaying error in a popup: couldn't connect to display
>>>>>>> "/tmp/launch-fpSStT/org.x:0"
>>>>>>>
>>>>>>> --aryeh
>>>>>>>
>>>>>>> On 9/28/10 1:46 PM, Steve Pieper wrote:
>>>>>>>> Hmmm -- interesting - it looks like that library file got corrupted
>>>>>>>> during the download/extraction process somehow. The file
>>>>>>>> lib/InsightToolkit/libITKFEM.3.18.dylib should exist and have a
>>>>>>>> size of
>>>>>>>> 984296 bytes. Maybe try re-downloading and extracting?
>>>>>>>>
>>>>>>>> -Steve
>>>>>>>>
>>>>>>>> On 09/27/2010 11:36 PM, Aryeh Weiss wrote:
>>>>>>>>>
>>>>>>>>> Thank you for your reply. Here is the error message when I run
>>>>>>>>> from
>>>>>>>>> the
>>>>>>>>> top of the tree:
>>>>>>>>> aryeh-weisss-macbookpro52-2:Slicer3-3.6.1-2010-08-20-darwin-x86
>>>>>>>>> amw$
>>>>>>>>> ./Slicer3
>>>>>>>>> Setting up launch environment...
>>>>>>>>> dyld: Library not loaded:
>>>>>>>>> /Users/hayes/Slicer-3-6/Slicer3-lib/Insight-build/bin/libITKFEM.3.18.dylib
>>>>>>>>>
>>>>>>>>>
>>>>>>>>>
>>>>>>>>>
>>>>>>>>>
>>>>>>>>>
>>>>>>>>>
>>>>>>>>>
>>>>>>>>> Referenced from:
>>>>>>>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
>>>>>>>>>
>>>>>>>>>
>>>>>>>>>
>>>>>>>>>
>>>>>>>>>
>>>>>>>>> Reason: no suitable image found. Did find:
>>>>>>>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/lib/InsightToolkit/libITKFEM.3.18.dylib:
>>>>>>>>>
>>>>>>>>>
>>>>>>>>>
>>>>>>>>>
>>>>>>>>>
>>>>>>>>>
>>>>>>>>>
>>>>>>>>>
>>>>>>>>> unknown file type, first eight bytes: 0x00 0x00 0x00 0x00 0xA4
>>>>>>>>> 0x87
>>>>>>>>> 0xFF
>>>>>>>>> 0xBF
>>>>>>>>>
>>>>>>>>> Launch
>>>>>>>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
>>>>>>>>>
>>>>>>>>>
>>>>>>>>>
>>>>>>>>>
>>>>>>>>>
>>>>>>>>> returned with error: child killed: trace trap
>>>>>>>>>
>>>>>>>>> CHILDKILLED 16672 SIGTRAP {trace trap}
>>>>>>>>> _X11TransSocketINETConnect() can't get address for
>>>>>>>>> /tmp/launch-fpSStT/org.x:6000: nodename nor servname provided, or
>>>>>>>>> not
>>>>>>>>> known
>>>>>>>>> Error displaying error in a popup: couldn't connect to display
>>>>>>>>> "/tmp/launch-fpSStT/org.x:0"
>>>>>>>>>
>>>>>>>>> --aryeh
>>>>>>>>>
>>>>>>>>> On 9/27/10 11:17 PM, Steve Pieper wrote:
>>>>>>>>>> p.s. the 3.6.1 binary from 2010-08-20 does work on my intel mac
>>>>>>>>>> running
>>>>>>>>>> 10.5.8...
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>> On 09/27/2010 04:52 PM, Steve Pieper wrote:
>>>>>>>>>>> Hi Aryeh -
>>>>>>>>>>>
>>>>>>>>>>> You shouldn't need to set any variables if you run the Slicer3
>>>>>>>>>>> executable at the top level of the extracted archive. What error
>>>>>>>>>>> message do you get?
>>>>>>>>>>>
>>>>>>>>>>> -Steve
>>>>>>>>>>>
>>>>>>>>>>> On 09/27/2010 03:12 PM, Aryeh Weiss wrote:
>>>>>>>>>>>> I just downloaded Slicer3, but it cannot start because it
>>>>>>>>>>>> cannot
>>>>>>>>>>>> find
>>>>>>>>>>>> the dylibs.
>>>>>>>>>>>>
>>>>>>>>>>>> I found this problem mentioned in earlier posts, but I cannot
>>>>>>>>>>>> solve it
>>>>>>>>>>>> from those posts.
>>>>>>>>>>>> One previous post mentions a setup shell script SlicerSetup.sh
>>>>>>>>>>>> (or
>>>>>>>>>>>> similar), but this does not exist anywhere in my
>>>>>>>>>>>> Slicer3-3.6.1-2010-08-20-darwin-x86 directory tree.
>>>>>>>>>>>> I tried setting DYLD_LIBRARY_PATH, but I cannot seem to get it
>>>>>>>>>>>> right --
>>>>>>>>>>>> something always eventually fails.
>>>>>>>>>>>>
>>>>>>>>>>>> Any ideas on this would be most appreciated -- it looks like a
>>>>>>>>>>>> nice
>>>>>>>>>>>> package, but so far I cannot even launch it.
>>>>>>>>>>>>
>>>>>>>>>>>> --aryeh
>>>>>>>>>>> _______________________________________________
>>>>>>>>>>> slicer-users mailing list
>>>>>>>>>>> [hidden email]
>>>>>>>>>>> http://massmail.spl.harvard.edu/mailman/listinfo/slicer-users
>>>>>>>>>>> To unsubscribe: send email to
>>>>>>>>>>> [hidden email] with
>>>>>>>>>>> unsubscribe as
>>>>>>>>>>> the
>>>>>>>>>>> subject
>>>>>>>>>>
>>>>>>>>>
>>>>>>>>>
>>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>
>>>>>
>>>>>
>>>>
>>>
>>>
>>
>
>
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Re: problem starting with OSX 10.5.8 -- solved, sort of.

Aryeh Weiss
ok -- I corrected enough of these dylib files to launch slicer. So far
it has not crashed, but I assume will eventually hit another invalid
dylib file. My file system is macos extended journaled. It is the
internal disk of my macbook pro.

Thank you for your assistance. If there will be a release that correct
this filename/link problem, I will prefer to download that.
In the meantime, linking the files manually is the workaround.

Also, I found that my X11 had broken, and I downloaded and reinstalled that.

So far, it atleast dislays and renders the MRI head, so that is a good
start.

--aryeh

On 9/30/10 11:16 PM, Steve Pieper wrote:

> Ahh - excellent clue! - these 0 length files should actually be symbolic
> links. That is, they should look like this:
>
> common:vtk-5.6 pieper$ ls -l libvtkzl*
> -rwxr-xr-x@ 1 pieper staff 84300 Mar 30 2010 libvtkzlib.5.6.0.dylib
> lrwxr-xr-x@ 1 pieper staff 22 Apr 27 16:10 libvtkzlib.5.6.dylib ->
> libvtkzlib.5.6.0.dylib
> lrwxr-xr-x@ 1 pieper staff 20 Apr 27 16:10 libvtkzlib.dylib ->
> libvtkzlib.5.6.dylib
>
>
> I wonder if this is because of the disk format of the volume where you
> extracted slicer - is it an external widows-formated drive by any chance?
>
> If you can try on a mac-formatted drive (like the root volume)?
>
> Steve
>
> On 09/30/2010 05:03 PM, Aryeh Weiss wrote:
>>
>>
>> I think I got it. It seems that all over the lib directories, I have
>> things like this:
>>
>> -rwxr-xr-x 1 amw staff 84300 Aug 4 02:23 libvtkzlib.5.6.0.dylib
>> -rwxr-xr-x 1 amw staff 0 Aug 20 18:52 libvtkzlib.5.6.dylib
>> -rwxr-xr-x 1 amw staff 0 Aug 20 18:52 libvtkzlib.dylib
>> -
>>
>> Then, when I launch Slicer3, I get the following:
>>
>> dyld: Library not loaded: libvtkzlib.5.6.dylib
>> Referenced from:
>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
>> Reason: no suitable image found. Did find:
>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/lib/vtk-5.6/libvtkzlib.5.6.dylib:
>>
>> unknown file type, first eight bytes: 0x00 0x00 0x00 0x00 0x98 0x83 0xFF
>> 0xBF
>>
>> Note that it is a different dylib this time, and it is the zero length
>> file that is referenced, and which then fails.
>>
>> At first it was files in Insight, where the zero length files were 3.18
>> and the nonzero length files were 3.18.0 . So I renamed all the 3.18.0
>> files to 3.18, and then the error occurred in a different dylib
>> directory. After two rounds of this, I gave up trying to manually do
>> this.
>>
>> I think that the original intention might have been to link the
>> "generic" names to the subversion specific names. Anyway, if this can be
>> done in the release, it will be a lot easier than for me to keep
>> launching the app, see where it fails , link or rename, and then iterate
>> -- there are a lot of dylib directories.
>>
>> --aryeh
>>
>> On 9/30/10 10:11 PM, Steve Pieper wrote:
>>> Hi Aryeh -
>>>
>>> I think that's a red herring - /Users/hayes refers to the original build
>>> directory, but it's clear from your error messages that is it finding
>>> the distribution version of that file, in your Desktop folder. It's just
>>> that the installation appears to have gotten corrupted for some unknown
>>> reason.
>>>
>>>
>>> Googling for "mac dylib unknown file type, first eight bytes" turns up
>>> lots of error reports about similar issues, but no real solutions that I
>>> could see... It's a mystery to me.
>>>
>>> -Steve
>>>
>>> On 09/30/2010 03:28 PM, Aryeh Weiss wrote:
>>>> Hi Steve,
>>>>
>>>> Before I give up, I have one question that may relate to my
>>>> inability to
>>>> run slicer. In the error test, there is a line:
>>>>
>>>> dyld: Library not loaded:
>>>> /Users/hayes/Slicer-3-6/Slicer3-lib/Insight-build/bin/libITKFEM.3.18.dylib
>>>>
>>>>
>>>>
>>>> Referenced from:
>>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
>>>>
>>>> Why is there a reference to /Users/hayes/....
>>>> I have no such user on my system -- is this path buried somewhere in
>>>> Slicer?
>>>>
>>>> Best regards
>>>> --aryeh
>>>>
>>>> On 9/28/10 10:20 PM, Steve Pieper wrote:
>>>>> Hi Aryeh -
>>>>>
>>>>> Here's a copy of the file that you can try downloading:
>>>>>
>>>>>> http://dl.dropbox.com/u/1686930/libITKFEM.3.18.0.dylib
>>>>>
>>>>> Save it in place of this file that the error message complains about:
>>>>>
>>>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/lib/InsightToolkit/libITKFEM.3.18.dylib
>>>>>
>>>>>
>>>>>
>>>>>
>>>>>
>>>>>
>>>>> Regarding which other version might work, I can't say for sure. If the
>>>>> replacement lib doesn't work, I think maybe we'll need to figure out
>>>>> why
>>>>> your directory ends up differently after the archive is unpacked.
>>>>>
>>>>> HTH,
>>>>> Steve
>>>>>
>>>>> On 09/28/2010 12:58 PM, Aryeh Weiss wrote:
>>>>>> I already tried "falling back" to one version previous, without
>>>>>> success.
>>>>>> It would be awkward to keep trying previous versions one by one,
>>>>>> but if
>>>>>> you have a particular version to suggest, I will be happy to try it.
>>>>>>
>>>>>> Alternatively, perhaps you can send me a known good file, and tell me
>>>>>> where to place it. If the error is unchanged, then we know
>>>>>> something is
>>>>>> wrong with the search path to this file, and there is a similarly
>>>>>> named
>>>>>> file buried somewhere else.
>>>>>>
>>>>>> --aryeh
>>>>>>
>>>>>> On 9/28/10 4:26 PM, Steve Pieper wrote:
>>>>>>> That is very curious - sorry you are having trouble. The report of
>>>>>>> the
>>>>>>> first 8 bytes of the file does not match the version I extracted. We
>>>>>>> could dig in more on that file, but maybe another idea would be to
>>>>>>> test
>>>>>>> if a different version of slicer works on your machine?
>>>>>>>
>>>>>>> -Steve
>>>>>>>
>>>>>>> On 09/28/2010 09:31 AM, Aryeh Weiss wrote:
>>>>>>>> Thanks again for your reply.
>>>>>>>>
>>>>>>>> I downloaded again and extracted.
>>>>>>>>
>>>>>>>> Same problem -- here is the output:
>>>>>>>>
>>>>>>>> Slicer3-3.6.1-2010-08-20-darwin-x86 amw$ ./Slicer3
>>>>>>>> Setting up launch environment...
>>>>>>>> dyld: Library not loaded:
>>>>>>>> /Users/hayes/Slicer-3-6/Slicer3-lib/Insight-build/bin/libITKFEM.3.18.dylib
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> Referenced from:
>>>>>>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> Reason: no suitable image found. Did find:
>>>>>>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/lib/InsightToolkit/libITKFEM.3.18.dylib:
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> unknown file type, first eight bytes: 0x00 0x00 0x00 0x00 0xA4 0x87
>>>>>>>> 0xFF
>>>>>>>> 0xBF
>>>>>>>>
>>>>>>>> Launch
>>>>>>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> returned with error: child killed: trace trap
>>>>>>>>
>>>>>>>> CHILDKILLED 17052 SIGTRAP {trace trap}
>>>>>>>> _X11TransSocketINETConnect() can't get address for
>>>>>>>> /tmp/launch-fpSStT/org.x:6000: nodename nor servname provided, or
>>>>>>>> not
>>>>>>>> known
>>>>>>>> Error displaying error in a popup: couldn't connect to display
>>>>>>>> "/tmp/launch-fpSStT/org.x:0"
>>>>>>>>
>>>>>>>> --aryeh
>>>>>>>>
>>>>>>>> On 9/28/10 1:46 PM, Steve Pieper wrote:
>>>>>>>>> Hmmm -- interesting - it looks like that library file got
>>>>>>>>> corrupted
>>>>>>>>> during the download/extraction process somehow. The file
>>>>>>>>> lib/InsightToolkit/libITKFEM.3.18.dylib should exist and have a
>>>>>>>>> size of
>>>>>>>>> 984296 bytes. Maybe try re-downloading and extracting?
>>>>>>>>>
>>>>>>>>> -Steve
>>>>>>>>>
>>>>>>>>> On 09/27/2010 11:36 PM, Aryeh Weiss wrote:
>>>>>>>>>>
>>>>>>>>>> Thank you for your reply. Here is the error message when I run
>>>>>>>>>> from
>>>>>>>>>> the
>>>>>>>>>> top of the tree:
>>>>>>>>>> aryeh-weisss-macbookpro52-2:Slicer3-3.6.1-2010-08-20-darwin-x86
>>>>>>>>>> amw$
>>>>>>>>>> ./Slicer3
>>>>>>>>>> Setting up launch environment...
>>>>>>>>>> dyld: Library not loaded:
>>>>>>>>>> /Users/hayes/Slicer-3-6/Slicer3-lib/Insight-build/bin/libITKFEM.3.18.dylib
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>> Referenced from:
>>>>>>>>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>> Reason: no suitable image found. Did find:
>>>>>>>>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/lib/InsightToolkit/libITKFEM.3.18.dylib:
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>> unknown file type, first eight bytes: 0x00 0x00 0x00 0x00 0xA4
>>>>>>>>>> 0x87
>>>>>>>>>> 0xFF
>>>>>>>>>> 0xBF
>>>>>>>>>>
>>>>>>>>>> Launch
>>>>>>>>>> /Users/amw/Desktop/Slicer3-3.6.1-2010-08-20-darwin-x86/bin/Slicer3-real
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>> returned with error: child killed: trace trap
>>>>>>>>>>
>>>>>>>>>> CHILDKILLED 16672 SIGTRAP {trace trap}
>>>>>>>>>> _X11TransSocketINETConnect() can't get address for
>>>>>>>>>> /tmp/launch-fpSStT/org.x:6000: nodename nor servname provided, or
>>>>>>>>>> not
>>>>>>>>>> known
>>>>>>>>>> Error displaying error in a popup: couldn't connect to display
>>>>>>>>>> "/tmp/launch-fpSStT/org.x:0"
>>>>>>>>>>
>>>>>>>>>> --aryeh
>>>>>>>>>>
>>>>>>>>>> On 9/27/10 11:17 PM, Steve Pieper wrote:
>>>>>>>>>>> p.s. the 3.6.1 binary from 2010-08-20 does work on my intel mac
>>>>>>>>>>> running
>>>>>>>>>>> 10.5.8...
>>>>>>>>>>>
>>>>>>>>>>>
>>>>>>>>>>>
>>>>>>>>>>> On 09/27/2010 04:52 PM, Steve Pieper wrote:
>>>>>>>>>>>> Hi Aryeh -
>>>>>>>>>>>>
>>>>>>>>>>>> You shouldn't need to set any variables if you run the Slicer3
>>>>>>>>>>>> executable at the top level of the extracted archive. What
>>>>>>>>>>>> error
>>>>>>>>>>>> message do you get?
>>>>>>>>>>>>
>>>>>>>>>>>> -Steve
>>>>>>>>>>>>
>>>>>>>>>>>> On 09/27/2010 03:12 PM, Aryeh Weiss wrote:
>>>>>>>>>>>>> I just downloaded Slicer3, but it cannot start because it
>>>>>>>>>>>>> cannot
>>>>>>>>>>>>> find
>>>>>>>>>>>>> the dylibs.
>>>>>>>>>>>>>
>>>>>>>>>>>>> I found this problem mentioned in earlier posts, but I cannot
>>>>>>>>>>>>> solve it
>>>>>>>>>>>>> from those posts.
>>>>>>>>>>>>> One previous post mentions a setup shell script SlicerSetup.sh
>>>>>>>>>>>>> (or
>>>>>>>>>>>>> similar), but this does not exist anywhere in my
>>>>>>>>>>>>> Slicer3-3.6.1-2010-08-20-darwin-x86 directory tree.
>>>>>>>>>>>>> I tried setting DYLD_LIBRARY_PATH, but I cannot seem to get it
>>>>>>>>>>>>> right --
>>>>>>>>>>>>> something always eventually fails.
>>>>>>>>>>>>>
>>>>>>>>>>>>> Any ideas on this would be most appreciated -- it looks like a
>>>>>>>>>>>>> nice
>>>>>>>>>>>>> package, but so far I cannot even launch it.
>>>>>>>>>>>>>
>>>>>>>>>>>>> --aryeh
>>>>>>>>>>>> _______________________________________________
>>>>>>>>>>>> slicer-users mailing list
>>>>>>>>>>>> [hidden email]
>>>>>>>>>>>> http://massmail.spl.harvard.edu/mailman/listinfo/slicer-users
>>>>>>>>>>>> To unsubscribe: send email to
>>>>>>>>>>>> [hidden email] with
>>>>>>>>>>>> unsubscribe as
>>>>>>>>>>>> the
>>>>>>>>>>>> subject
>>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>
>>>>>>
>>>>>>
>>>>>
>>>>
>>>>
>>>
>>
>>
>


--
Aryeh Weiss
School of Engineering
Bar Ilan University
Ramat Gan 52900 Israel

Ph:  972-3-5317638
FAX: 972-3-7384051

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